Job Description P76044 Confidence 97.32% Date Thu Jan 5 12:17:47 GMT 2012 Rank 49 Aligned Residues 191 % Identity 18% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		L	E	K	F	R	Y	I	K	E	M	G	F	D	G	F	E	I	D	G	K	L	L	V	N	.	.	.	.	.	.	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	F	E	A	A	L
Template Known Secondary structure											T	T		S								S		T	T	T		G	G	G	T	T								S				T	T	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																				.	.	.	.	.	.	90	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	.	.	.	.	.	Q	D	H	M	I	N	T	L	A	D	A	R	R
Query Conservation																																																																.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		E	S	G	V	K	E	V	A	V	F	A	A	.	.	.	.	.	.	.	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R
Template Known Secondary structure			T	T										.	.	.	.	.	.	.	S										S	S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.																						.	.
Predicted Secondary structure																																							.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Query SS confidence																																							.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Query Sequence		Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	.	.	.	.	G	H	V	H	I	A	D	N	H	R	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	.	.	.	.
Query Conservation																																							.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Alig confidence																			.	.																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Template Conservation																			.	.
Template Sequence		E	L	Q	Q	M	G	C	Y	E	V	S	L	G	D	T	I	G	.	.	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	V	F	D	S	S	V	A	G	L	G	G	C	P	Y
Template Known Secondary structure						T	T		S							S	S	S	.	.															T	T	T	S		G	G	G						B		T	T	S												T	T							B	G	G	G			B		G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
						216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		A	K	G	A	T	G	N	V	A	S	E	D	V	L	Y	L	L	N	G	L	E	I	H
Template Known Secondary structure		G	T	T		B		B		B											T	T		B
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions