Job Description P76044 Confidence 33.13% Date Thu Jan 5 12:17:47 GMT 2012 Rank 412 Aligned Residues 213 % Identity 13% Template c1uasA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of rice alpha-galactosidase Resolution 1.50 Å

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		15	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	E	K	F	R	Y	I	K	E	.	.	.	.	.	M	G	F	D	G	F	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E
Query Conservation												.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																																																																																	.
Template Sequence		I	R	E	T	A	D	A	L	V	N	T	G	L	A	K	L	G	Y	Q	Y	V	N	I	D	D	C	W	A	E	Y	S	R	D	S	Q	G	N	F	V	P	N	R	Q	T	F	P	S	G	I	K	A	L	A	D	Y	V	H	A	K	G	L	K	L	G	I	Y	S	D	A	G	S	Q	T	C	S	N	K	M	P	.
Template Known Secondary structure												T	S					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T												T	T									S	S	S	B		T	T	S	S	S	B	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	L	N	G	L	K	Q	I	E	R	I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	T	G	T	V	V	Y	L	E	P	L	N	R	Y	Q
Query Conservation
Alig confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	S	L	D	H	E	E	Q	D	V	K	T	F	A	S	W	G	V	D	Y	L	K	Y	D	N	C	N	D	A	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	E	R	Y	T	R	M	S	N	A	M	K	T	Y	G	K	N	I	F	F	S	L	C	E	W	G	K
Template Known Secondary structure		.	.	.			T	T													T												T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S						S	T	T	T
Template Predicted Secondary structure		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		D	H	M	I	N	T	L	A	D	A	R	R	Y	I	V	E	N	D	L	K	H	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	G	H	V	H	I	A	D	N	H	R	Y	Q	P	G	S	G	T	L	D	F	H	A	L	F	E	Q	L	.	R	A	D
Query Conservation																																																																														.
Alig confidence									.	.	.	.	.	.	.	.																																																														.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		E	N	P	A	T	W	A	.	.	.	.	.	.	.	.	G	R	M	G	N	S	W	R	T	T	G	D	I	A	D	N	W	G	S	M	T	S	R	A	D	E	N	D	Q	W	A	A	Y	A	G	P	G	G	W	N	D	P	D	M	L	E	V	G	N	G	G	M	S	E	A	E	Y	R	S	H	F	S	I	W	A
Template Known Secondary structure		T		G	G	G	T	G	.	.	.	.	.	.	.	.	G	G	T		S					S	S				S	S													T	T	G	G	G		B	T	T	B									T	T	S	S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Q	G	Y	V	V	Y	E	G	R	I	R	A	E	D	P	A	Q	A	Y	R	D	S	L	A	W	L	R	T
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		L	A	K	A	P	L	L	I	G	C	D	V	R	S	M	S	Q	Q	.	.	.	.	.	T	K	N	I	L	S	N
Template Known Secondary structure			T	T							S		T	T	S					.	.	.	.	.						T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions