Job Description P76044 Confidence 97.11% Date Thu Jan 5 12:17:47 GMT 2012 Rank 51 Aligned Residues 203 % Identity 13% Template c1sr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure														.	.	.										.																				.	.	.	.
Query SS confidence														.	.	.										.																				.	.	.	.
Query Sequence		P	E	N	I	L	E	K	F	R	Y	I	K	.	.	.	E	M	G	F	D	G	F	E	I	.	D	G	K	L	L	V	N	N	I	E	E	V	K	A	A	I	K	E	T	.	.	.	.	G	L	P	V	T	T	A	C	G	G	Y	D	G	W	I	G	D	F	I	E	E	R	R	L	N	G	L	K	Q	I	E	R
Query Conservation														.	.	.										.																				.	.	.	.
Alig confidence														.	.	.										.																				.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	X	S	P	A	R	K	R	R	X	F	D	L	L	V	R	X	G	Y	K	E	I	E	V	G	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	I	E	R
Template Known Secondary structure																			T		S							T	T	T														T	T		S		T	T									S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																.	150	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																									.									.
Query SS confidence																																																									.									.
Query Sequence		I	L	E	A	L	A	E	V	G	G	K	G	I	V	V	P	A	A	W	G	M	F	T	F	R	L	P	P	M	T	S	P	R	S	L	D	G	D	R	K	M	V	S	D	S	L	R	V	L	E	Q	V	A	A	R	.	T	G	T	V	V	Y	L	E	.	P	L	N	R	Y	Q	D	H	M	I	N	T	L	A	D
Query Conservation																																																									.									.
Alig confidence																				.	.	.																																			.									.
Template Conservation																				.	.	.
Template Sequence		T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	.	.	.	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	T	E	L	E	Y	A	K	Q
Template Known Secondary structure							T	T		S										.	.	.									T	S																									S		S	S										T	G	G	G	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		162	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.								.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																													.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																													.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	R	Y	I	V	E	N	D	L	K	H	.	.	.	.	.	.	V	Q	I	I	G	D	F	Y	H	M	N	I	E	E	D	N	L	A	Q	A	L	H	D	N	R	D	L	L	.	.	.	.	.	.	.	G	H	V	H	I	A	D	N	H	R	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.																													.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.									.	.																			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	.	.	X	T	T	P	N	V	Y	A	D	S	I	E	W	X	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A	E	L	G	F	A	A	G	A	D	R	I
Template Known Secondary structure													B	T	T	B									S	S		.	.		S																S	S	S	G	G	G								B		T	T	S												T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
								214	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.				.	.
Query SS confidence		.	.	.	.	.	.				.	.
Query Sequence		.	.	.	.	.	.	P	G	S	.	.	G	T	L	D	F	H	A	L	F	E	Q	L	R	A	D	N	Y	Q
Query Conservation		.	.	.	.	.	.				.	.
Alig confidence		.	.	.	.	.	.				.	.
Template Conservation
Template Sequence		E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D
Template Known Secondary structure				B	G	G	G		S	S	T	T		B		B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions