Job Description P75685 Confidence 3.65% Date Thu Jan 5 12:13:07 GMT 2012 Rank 13 Aligned Residues 38 % Identity 16% Template c2iykB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the upf2-interacting domain of2 nonsense mediated mrna decay factor upf1 Resolution 2.95 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		P	F	V	A	N	S	P	L	M	S	F	F	Y	E	H	P	E	.	.	.	D	Y	K	Q	Y	L	T	H	E	G	E	Y	K	P	E	A	R	A	W	Q	T
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		P	L	I	Q	D	R	C	F	L	S	W	L	V	K	I	P	S	E	Q	E	Q	L	R	A	R	Q	I	T	A	Q	Q	I	N	K	L	E	E	L	W	K	E
Template Known Secondary structure			S			T	T				T	T	T	S											S																	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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