Job Description P76237 Confidence 100.00% Date Thu Jan 5 12:21:03 GMT 2012 Rank 6 Aligned Residues 152 % Identity 24% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	S	R	E	N	I	S	D	A	M	T	G	L	Y	N	R	K	I	L	T	P	E	L	E	Q	R	L	Q	K	L	V	Q	S	G	S	S	V	M	F	I	A	I	D	M	D	K	L	K	Q	I	N	D	T	L	G	H	Q	E	G	D	L	A	I	T	L	L	A	Q	A	I	K	Q	S	I	R	K	S	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W
Template Known Secondary structure									B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	L	G	G	D	E	F	C	I	I	L	V	D	S	T	P	Q	I	A	A	Q	L	P	E	R	I	E	K	R	L	Q	H	I	A	P	Q	K	E	I	G	F	S	S	G	I	Y	A	M	K	E	N	D	T	L	H	D	A	Y	K	A	S	D	E	R	L	Y	V	N	K	Q	N	K	N	S	R
Query Conservation
Alig confidence																																	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	.	.	.	.	.	E	E	A	P	L	H	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S	G	G	R	R
Template Known Secondary structure							T	T								S																	.	.	.	.	.																T	T																				T	T	S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions