Return to main results Retrieve Phyre Job Id

Job DescriptionP76237
Confidence100.00%DateThu Jan 5 12:21:03 GMT 2012
Rank8Aligned Residues153
% Identity18%Templatec3hvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx ggdef domain from pseudomonas2 aeruginosa
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360.........370.........380.........390.........400.........410.........420..
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL
Query Conservation   
  
 



 

  
   
   
          


 



 

 


 


  

 

  

  
    
  
 
 
 
Alig confidence 















































































Template Conservation 

  
 



 

  
   
   
           

 
 
     

   
    
  
      
           
 
Template Sequence  VSSQDPVTGLYNRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGEEADLARF
Template Known Secondary structure 


B
TTT
ST


TTGGG

Template Predicted Secondary structure 
























Template SS confidence 















































































   266...270.........280.........290.........300.........310.........320.........330.........340.....
 
   423......430.........440.........450.. .......460......... 470.........480.........490.....
Predicted Secondary structure 






.....




.








Query SS confidence 





























. . . . .
















.

























Query Sequence  GGDEFCIILVDSTPQIAAQLPERIEKRLQH. . . . . IAPQKEIGFSSGIYAMK. ENDTLHDAYKASDERLYVNKQNKNSR
Query Conservation 




 


       
  
 
 
   
  .....      

 




   .       

  

 


 

  



Alig confidence 





























.....
















.

























Template Conservation      
 
                    
                


 
           

  
  

  

  
 
 
Template Sequence  GDSIFAALFKGKTPEQAQAALQRLLKKVENHLFELNGRSAQATLSIGVAGLDEKTAKAQDVMNRAHRCADDAARKGGSQ
Template Known Secondary structure  SSST

T

TT



TT


TT
SS
Template Predicted Secondary structure 
































Template SS confidence 














































































   346...350.........360.........370.........380.........390.........400.........410.........420....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions