Return to main results Retrieve Phyre Job Id

Job DescriptionP76237
Confidence92.00%DateThu Jan 5 12:21:03 GMT 2012
Rank20Aligned Residues78
% Identity18%Templatec2aq4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna repair protein rev1; PDBTitle: ternary complex of the catalytic core of rev1 with dna and dctp.
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   403......410... ......420.........430.........440.........450.........460.........470.........
Predicted Secondary structure 
...



















Query SS confidence 










. . .

































































Query Sequence  TLLAQAIKQSI. . . RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYK
Query Conservation    

  
    ...
  
 
 
 




 


       
  
 
 
   
        

 




          

 
Alig confidence 










...























.

















..










.........
Template Conservation     
  
   
        

  



  

 
     .   

  

  
   
 
.. 
 




 

.........
Template Sequence  QLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIPDTL. NARLCEEIRQEIFQGTNG. . CTVSIGCSDSL. . . . . . . . . V
Template Known Secondary structure  TT

STT


.SS..

SS.........
Template Predicted Secondary structure 
















.

..



.........
Template SS confidence 















































































   442.......450.........460.........470......... 480.........490....... ..500........ .
 
   480.........490..
Predicted Secondary structure 

Query SS confidence 












Query Sequence  ASDERLYVNKQNK
Query Conservation   

 


 

  
Alig confidence 












Template Conservation 





  


 
Template Sequence  LARLALKMAKPNG
Template Known Secondary structure 
SS
Template Predicted Secondary structure 





Template SS confidence 












   516...520........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions