Job Description P76237 Confidence 65.82% Date Thu Jan 5 12:21:03 GMT 2012 Rank 45 Aligned Residues 61 % Identity 15% Template c1t94B_ PDB info PDB header:replication Chain: B: PDB Molecule:polymerase (dna directed) kappa; PDBTitle: crystal structure of the catalytic core of human dna2 polymerase kappa Resolution 2.40 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.																							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	I	T	L	L	A	Q	A	I	K	Q	S	I	R	K	S	D	Y	A	I	R	L	G	G	D	E	F	C	I	I	L	V	D	S	T	P	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	L	P	E	R	I	E	K	R	L	Q	H	I	A	P	Q	K
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																		.	.	.																																																									.	.	.
Template Sequence		A	V	S	K	E	V	K	E	I	L	A	D	Y	D	P	N	.	.	.	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	Q	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	.	.	.	K	T
Template Known Secondary structure												T	T	T		T	T	.	.	.					S	S	S														T	T			G	G	G	G													S	S															.	.	.		S
Template Predicted Secondary structure																		.	.	.																																																									.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.
		458	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	F	S	S	G	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	T	A	S	A	G	I	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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