 |
Job Description | P00909 | Confidence | 76.74% | Date | Thu Jan 5 10:57:09 GMT 2012 |
Rank | 274 | Aligned Residues | 72 |
% Identity | 17% | Template | d1vjia_ |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.00 |
|
 |
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |
| . |
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | R | A | I | A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | L | S | I | D | L | N | R | T | R | E | L | A | P | K | L | G | H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | . |
R | E | L | S | H | F | . |
A | N | G | F | L | I | G | S | A | L | M | A | H | D | D | L | H | A |
Query Conservation |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   | . |   |   |   |   |   |
| . |   |
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   | . | . |   |   |
|
|
|   |   |
|   |   | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |
Template Sequence |   |
A | E | S | L | N | K | Y | G | I | L | Y | C | H | V | I | E | A | R | M | H | T | . |
. |
. |
. |
. |
. |
. |
L | M | P | M | R | K | A | F | . |
. |
K | G | T | F | I | S | A | G | G | F | . |
T | R | E | D | G | N | E | A | V | S | K | G | R | T | D | L | V | A | Y | G | R | W | F | L | A | N | P | D | L | P | K |
Template Known Secondary structure |   |
 |  |  | T | T | T | T | T |
| S |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| . | . |
| S |  |  |  |  |  | S | S |
| . |
|  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  | S |  |  |  |  |  |
| T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 280 | . | . | . | . | . | . | |
|
. | . | . | 290 | . | . | . | . | . | . | |
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |
  |   |
248 | . | 250 | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | V | R | R |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |   |
Template Sequence |   |
R | F | Q | V |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
338 | . | 340 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|