Job Description P00909 Confidence 99.61% Date Thu Jan 5 10:57:09 GMT 2012 Rank 43 Aligned Residues 205 % Identity 17% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.																						.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	D	A	L	Q	G	A	R	T	A	F	I	L	E	C	K	K	A	S	P	S	K	G	V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	K	.	H	Y	A	S	A	I	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	E	K	Y	F	Q	G	S
Query Conservation																																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		F	A	Q	L	N	D	R	R	E	G	A	F	V	P	F	V	T	L	G	D	P	G	I	.	.	.	.	.	.	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C
Template Known Secondary structure								T	T										T	T	S	S			.	.	.	.	.	.													T	T		S	S								S			T	T															T	T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.					.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.
Predicted Secondary structure												.								.	.	.	.					.	.	.																																																.	.	.
Query SS confidence												.								.	.	.	.					.	.	.																																																.	.	.
Query Sequence		F	N	F	L	P	I	V	S	Q	I	.	A	P	Q	P	I	L	C	.	.	.	.	K	D	F	I	.	.	.	I	D	P	Y	Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	.	.	.	S
Query Conservation												.								.	.	.	.					.	.	.																																																.	.	.
Alig confidence												.								.	.	.	.					.	.	.					.																	.	.																									.	.	.
Template Conservation																																			.																	.	.
Template Sequence		F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N	L	V	F	N	N	G	I	D	A	F	.	Y	A	R	C	E	Q	V	G	V	D	S	V	L	V	A	D	.	.	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A
Template Known Secondary structure													S	S	S													T	T						.								T							T	T	.	.			G	G	G											T	T									T	T
Template Predicted Secondary structure																																			.																	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																												.	.																			.																	.
Query SS confidence																																												.	.																			.																	.
Query Sequence		N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	.	.	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	.	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	.
Query Conservation																																												.	.																			.																	.
Alig confidence																																												.	.																			.																	.
Template Conservation
Template Sequence		D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A	A	P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I
Template Known Secondary structure															S						S	S	S	S				S	S	S														T	T								S	S			S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
						242	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	D	D	L	H	A	A	V	R	R	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions