|   |
69 | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | A | R | I | A | A | I | Y | K | . |
H | Y | A | S | A | I | S | V | L | T | D | E | K | Y | F | Q | G | S | F | N | F | L | P | I | V | S | Q | I | A | P | . |
. |
Q | P | I | L | C | K | D | F | I | I | D | P | Y | Q | I | Y | L | A | R | Y | Y | Q | A | D | A | C | L | L | M | L | S | V | L | D | D | D | Q |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   | . |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   | . | . |   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|   |
Template Sequence |   |
D | P | V | E | L | V | E | K | L | I | E | E | G | F | T | L | I | H | V | V | D | L | S | N | A | I | E | N | S | G | E | N | L | P | V | L | E | K | L | S | E | F | A | E | H | I | Q | I | G | G | G | I | R | S | L | D | Y | A | E | K | L | R | K | L | G | Y | R | R | Q | I | V | S | S | K | V | L | E | D | P | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T |  |  |  |  |  |  | G | G | G | G | G | G | G |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
. | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | L | T | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | S | N | E | E | E | Q | E | R | A | I | A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | L | S | I | . |
. |
D | L | N | R | T | R | E | L | A | P | K | L |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   | . | . |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
. | . | . |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   | . |
Template Sequence |   |
. |
. |
. |
F | L | K | S | L | R | E | I | D | V | E | P | V | F | S | L | D | T | R | G | G | R | V | A | F | K | G | W | L | A | E | E | E | I | D | P | V | S | L | L | K | R | L | K | E | Y | G | L | E | E | I | V | H | T | E | I | E | K | D | G | T | L | Q | E | H | D | F | S | L | T | K | K | I | A | I | E | . |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  | T | T |  |  |
|
| T | T |
| S | S |
| S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  | T | T |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
  |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
. | |
|
|
|
|
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
| . | . | . | . | . | . |
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | R | E | L | S | H | . |
F | . |
. |
. |
. |
. |
. |
A | N | G | F | L | I | G | S | A | L | M | A | H | D | D | L | H | A | A | V | R | R | V |
Query Conservation |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   | . |
| . | . | . | . | . | . |   |
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |
Template Sequence |   |
. |
A | E | V | K | V | L | A | A | G | G | I | S | S | E | N | S | L | K | T | A | Q | K | V | H | T | E | T | N | G | L | L | K | G | V | I | V | G | R | A | F | L | E | G | I | L | T | V | E | V | X | K | R | Y |
Template Known Secondary structure |   |
. |  | T |
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |
|  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |