 |
Job Description | P00909 | Confidence | 92.48% | Date | Thu Jan 5 10:57:09 GMT 2012 |
Rank | 210 | Aligned Residues | 99 |
% Identity | 18% | Template | d1ofda2 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.00 |
|
 |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | D | Q | Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | . |
. |
. |
. |
. |
L | T | E | V | S | N | E | E | E | Q | E | R | A | I | . |
A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | I | D | L | N | R | T | R | E | L |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   | . | . | . | . | . |
|
|
|
|
|   |   |   |
|
|   |   |
|   | . |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
S | I | E | D | L | A | Q | L | I | Y | D | L | H | Q | I | N | P | E | A | Q | V | S | V | K | L | V | A | E | I | G | I | G | T | I | A | A | G | V | A | K | A | N | A | D | I | I | Q | I | S | G | H | D | G | G | T | G | A | S | P | L | S | S | I | K | H | A | G | S | P | W | E | L | G | V | T | E | V | H | R | V |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| T | T |
|
|
| S | S |  |  |  |  |  |  |  |  | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1011 | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 |
  |
  |   |
202 | . | . | . | . | |
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | K | L | G | . |
. |
H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | . |
R | E | L | S | H | F | A | N | G | F | L | I | G | S | A | L | M |
Query Conservation |   |
  |   |   |   |
| . | . |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   | . |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|
Template Sequence |   |
L | M | E | N | Q | L | R | D | R | V | L | L | R | A | D | G | G | L | K | T | G | W | D | V | V | M | A | A | L | M | G | A | E | E | Y | G | F | G | S | I | A | M |
Template Known Secondary structure |   |
 |  |  | T | T |
| G | G | G |
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1091 | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|