Return to main results Retrieve Phyre Job Id

Job DescriptionP00909
Confidence43.93%DateThu Jan 5 10:57:09 GMT 2012
Rank443Aligned Residues73
% Identity21%Templated1jaka1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-N-acetylhexosaminidase catalytic domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150.........160.........170.........180.. .......190.........200..
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Query Sequence  VLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVG. . . . . . . . . . . . . . . . . INNRDLRDLSIDLNRTRELA
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Template Sequence  YYTKAEYKEIVRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELA
Template Known Secondary structure 
B
TT



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GGGSTTS






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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   203......210..
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Query Sequence  PKLGHNVTVI
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Template Sequence  ALTPGRYLHI
Template Known Secondary structure  T

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   301........310
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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