Job Description P00909 Confidence 97.12% Date Thu Jan 5 10:57:09 GMT 2012 Rank 165 Aligned Residues 270 % Identity 14% Template d1j93a_ SCOP info TIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD Resolution 2.30

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		114	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	F	I	I	D	P	Y	Q	I	Y	L	.	.	.	.	.	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	.	.	.	.	.	.	.	.	.	.	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A
Query Conservation														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																			.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		R	D	R	S	E	N	V	D	L	V	V	E	I	S	L	Q	P	W	K	V	F	R	P	D	G	V	I	L	F	S	D	I	L	T	P	.	.	.	.	.	.	.	.	.	L	S	G	M	N	I	P	F	D	I	I	K	G	K	G	P	V	I	F	D	P	L	R	T	A	A	D	V	E	K	V	R	E	F	I	P
Template Known Secondary structure		T	T	T	T	T																			S								T	T	T		.	.	.	.	.	.	.	.	.				T	T							T	T	T					S	S				S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	.	.	D	D	L	H	A	A	V	R	R	V	L	L	G	E
Query Conservation																																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.																									.	.											.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																														.	.																																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	K	S	V	P	Y	V	G	E	A	L	T	I	L	R	K	E	V	N	N	Q	A	A	V	L	G	F	V	G	.	.	A	P	F	T	L	A	S	Y	V	V	E	G	G	S	S	K	N	F	T	K	I	K	R	L	A	F	A	E	P	K	V	L	H	A	L	L	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																			T	T	S	S								.	.												S	B			S	S																				.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.	.																																					.	.	.	.
Template SS confidence
											123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	C	G	L	T	R	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	V	L	S	L	A	A	V	Q	L	H	G	N
Query Conservation
Alig confidence		.																									.	.																.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation		.																									.	.																.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		.	Q	K	F	A	T	S	M	A	K	Y	I	R	Y	Q	A	D	S	G	A	Q	A	V	Q	I	.	.	F	D	S	W	A	T	E	L	S	P	V	D	F	E	E	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	P	Y	L	K	Q	I	V	D	S	V	K	L	T	H	P	N	L	P	L	I	L	Y	.
Template Known Secondary structure		.																	T	T		S					.	.			G	G	G	G	G	S								.	.	.	.	.	.	.	.	.	.	.	.		T															S	T	T							.
Template Predicted Secondary structure		.																									.	.																.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
			188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.													.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		E	E	Q	L	Y	I	D	T	L	R	E	A	L	P	A	H	V	A	I	W	K	A	L	S	V	G	E	T	L	P	A	R	E	F	Q	H	V	D	K	Y	V	L	D	N	G	Q	G	G	S	G	Q	R	F	D	W	S	L	L	N	G	Q	S	L	G	N	V	L	L	A	G	G	L	G	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	S	G	G	L	L	E	R	L	P	L	T	G	V	D	V	V	S	L	D	W	T	V	.	.	.	.	.	.	.	D	M	A	D	G	R	R	R	L	G	P	N	V	A	I	Q	G	N	V	D	P	G	V	L	F	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		T	T	T	G	G	G	G	G	G	G			S						T	T	S	.	.	.	.	.	.	.									T		S	S	S						B		G	G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
																							252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
						410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure		.	.	.	.										.
Query SS confidence		.	.	.	.										.
Query Sequence		.	.	.	.	A	D	N	C	V	E	A	A	Q	.	T	G	C	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	A	S	V	F	Q	T	L	R	A	Y
Query Conservation		.	.	.	.										.
Alig confidence		.	.	.	.										.																			.
Template Conservation																																		.
Template Sequence		K	E	F	I	T	N	R	I	N	D	T	V	K	K	A	G	K	G	K	H	I	L	N	L	G	H	G	I	K	V	G	T	.	P	E	E	N	F	A	H	F	F	E	I	A	K	G	L
Template Known Secondary structure																		S	S	S			B		B	S	S				T	T		.														T
Template Predicted Secondary structure																																		.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions