 |
Job Description | P00909 | Confidence | 60.71% | Date | Thu Jan 5 10:57:09 GMT 2012 |
Rank | 348 | Aligned Residues | 88 |
% Identity | 8% | Template | d1ccwa_ |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 1.60 |
|
 |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | L | . |
. |
. |
T | E | V | S | N | E | E | E | Q | E | R | A | I | A | L | G | A | K | V | V | G | I | N | N | R | D | L | R | D | L | S | I | D | L | N | R | T | R | E | L | A | P | K | L | G | H | N | V | T | V | I | S | E | S | G | I | N | T | . |
. |
. |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
| . | . | . |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
N | K | I | L | D | H | A | F | T | N | A | G | F | N | V | V | N | I | G | V | L | S | P | Q | E | L | F | I | K | A | A | I | E | T | K | A | D | A | I | L | V | S | S | L | Y | G | Q | G | E | I | D | C | K | G | L | R | Q | K | C | D | E | A | G | L | E | G | I | L | L | Y | V | G | G | N | I | V | V | G | K | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| S | S | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  | S |
| S | S | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
220 | . | . | . | . | . | . | . | . | |
. | 230 | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
. |
. |
Y | A | Q | V | R | E | L | S | H | . |
F | A | N | G | F |
Query Conservation |   |
. | . |   |   |
|   |   |   |   |   |   | . |
|   |
|
|
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
H | W | P | D | V | E | K | R | F | K | D | M | G | Y | D | R | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|