Job Description P00909 Confidence 93.14% Date Thu Jan 5 10:57:09 GMT 2012 Rank 207 Aligned Residues 155 % Identity 17% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	.
Query Conservation																																																																																	.
Alig confidence																																						.														.	.	.	.	.	.	.																							.
Template Conservation																																						.														.	.	.	.	.	.	.
Template Sequence		S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R	Q	.	.	.	.	.	.	.	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A
Template Known Secondary structure																		T									S									T	T	.		S						G	G	G	T	T		.	.	.	.	.	.	.									T	T	S	S								T	T	S
Template Predicted Secondary structure																																						.														.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
						220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260														.	.	.	.	.	.			.	.	.	270	.
Predicted Secondary structure		.	.	.	.										.	.	.	.	.	.	.																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence		.	.	.	.										.	.	.	.	.	.	.																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		.	.	.	.	Y	A	Q	V	R	E	L	S	H	.	.	.	.	.	.	.	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	.	.	A	V	R	R	V	L	L	G	E	N	K	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	R	G	Q	.	.	D	A	K	A	A
Query Conservation		.	.	.	.										.	.	.	.	.	.	.																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence		.	.	.	.										.	.	.	.	.	.	.																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A
Template Known Secondary structure		G	G	G															T	T			S													S	S	S												G	G	G	G	S	S										T						T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.			.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure								.	.									.	.	.	.	.
Query SS confidence								.	.									.	.	.	.	.
Query Sequence		Y	D	A	G	A	I	.	.	Y	G	G	L	I	F	V	A	.	.	.	.	.	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A
Query Conservation								.	.									.	.	.	.	.
Alig confidence								.	.									.	.	.	.	.
Template Conservation
Template Sequence		V	A	T	G	V	A	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L	N	R	M	G	A	L	L	E	T	L
Template Known Secondary structure							S								S		T	T	T			T	T	S		S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions