Job Description P00909 Confidence 90.91% Date Thu Jan 5 10:57:09 GMT 2012 Rank 217 Aligned Residues 157 % Identity 17% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.														.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation													.														.																																																	.	.	.	.	.
Template Sequence		L	N	A	H	A	I	T	A	S	P	Y	.	M	G	S	D	S	L	Q	P	F	M	R	Y	P	.	D	K	A	V	F	V	L	C	K	T	S	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G	P	W	N	V	N	G	N	V	G	L	.	.	.	.	.	V
Template Known Secondary structure		S			S						S	T	.	T										T		T	.	T	S									S	S	G	G	G	G	G	T	T	T	S			T	T												T	T	T	T		T	T	S					.	.	.	.	.
Template Predicted Secondary structure													.														.																																																	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																												.	.	.	.	.				.
Query SS confidence																																												.	.	.	.	.				.
Query Sequence		D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	F	A	N	.	.	.	.	.	G	F	L	.	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T
Query Conservation																																												.	.	.	.	.				.
Alig confidence																																												.	.	.	.	.				.
Template Conservation
Template Sequence		V	G	A	T	D	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	Q	G	G	S	L	K	A	S	L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	R	A	A	D	P	R	A	A	A	K	E	L	C	E	E	I	N	A	I	R	F	A	K
Template Known Secondary structure				T	T													S	S								S	S	T	T														T	T	S								S					S		S																		S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
				264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.
Predicted Secondary structure		.	.																								.	.	.
Query SS confidence		.	.																								.	.	.
Query Sequence		.	.	R	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	.	.	.	S	P	R	C	V	N
Query Conservation		.	.																								.	.	.
Alig confidence		.	.																								.	.	.
Template Conservation
Template Sequence		G	A	S	V	E	L	A	K	A	L	V	D	S	H	C	V	R	F	G	N	F	T	L	K	S	G	K	S	S	P	I	Y	I	D
Template Known Secondary structure		S												T	T	S				S			B		T	T	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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