Job Description P00909 Confidence 97.97% Date Thu Jan 5 10:57:09 GMT 2012 Rank 138 Aligned Residues 173 % Identity 17% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A
Query Conservation
Alig confidence																																																								.														.	.	.	.	.	.	.
Template Conservation																																																								.														.	.	.	.	.	.	.
Template Sequence		A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	A	Y	K	L	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	A	L	G	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	.	.	.	.	.	.	.	F	R	L	L	S
Template Known Secondary structure								T	T											.															T	T									S	G	G	G								.		S						G	G	G	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.														.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.					.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.											.	.	250	.	.	.	.	.	.	.						.	.	260	.
Predicted Secondary structure																		.							.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																		.							.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	.	T	Y	A	Q	V	R	.	.	.	.	E	L	S	H	.	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	.	.	.	.	.	.	.	.	.	.	A	V	R	R	V	L	L	G	E	N	.	.	.	.	.	K	V	C	G
Query Conservation																		.							.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence																		.							.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	G
Template Known Secondary structure				G	G	G		S								T	T																T	T											B			S		S	S	S	S	S	B			T	T									B	S	S						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		262	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure					.	.														.	.														.	.	.	.	.
Query SS confidence					.	.														.	.														.	.	.	.	.
Query Sequence		L	T	R	.	.	G	Q	D	A	K	A	A	Y	D	A	G	A	I	.	.	Y	G	G	L	I	F	V	A	T	S	P	R	C	.	.	.	.	.	V	N	V	E	Q	A	Q	E	V	M	A	A	A
Query Conservation					.	.														.	.														.	.	.	.	.
Alig confidence					.	.														.	.														.	.	.	.	.
Template Conservation
Template Sequence		R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H	P	E	P	E	K	A	L	S	D	G	K	Q	S	L	D	F	E	L	F	K	E	L	V	Q	E	M
Template Known Secondary structure			G	G	G												T		S						B		S		T	T	T		S	S	S	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions