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Job DescriptionP00909
Confidence65.15%DateThu Jan 5 10:57:09 GMT 2012
Rank329Aligned Residues173
% Identity6%Templatec3obeB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70........ .80.........90.........100.........110.........120.........130.........140....
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Query Sequence  DDFDPARIAAIYK. HYASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDD
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Template Sequence  TFIASKDYKKXVDDAGLRISSSHLTPSLREYTKENXPKFDEF. . . . . . . . . . . . WKKATDIHAELGVSCXVQPSLPRIEN
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   99100.........110.........120.........130.........140 .........150.........160......
 
   145 ....150.........160..... ....170..... ....180.........
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Query Sequence  Q. . . . . . . . . YRQLAAVAHSLEMGVLTEVS. . . . . . . . . . . . . . . . . . . . . . . . . NEEEQERAIA. LGAKVVGINNRDLR
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Template Sequence  EDDAKVVSEIFNRAGEITKKAGILWGYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLKNTDPDKVXFEL. DVY
Template Known Secondary structure  TTT


SGGGS

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   167..170.........180.........190.........200.........210.........220.........230.........240.. ...
 
   190.........200.........210... ......220........ .230..... ....240.........250.
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Query Sequence  DLSIDLNRTRELAPKLGHNVTVIS. . . . . . . . . ESGINTYAQVRELSH. FANGFLI. GSALMAHDDLHAAVRR
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Template Sequence  WAVXGQQDPVEWXENYPNRFKLLHIKDRWIIGDSGXXNFPNIFKKAYEIGILGYYVELEGDKKGRTQFEGVEK
Template Known Secondary structure  TT

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   246...250.........260.........270.........280.........290.........300.........310........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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