 |
Job Description | P00909 | Confidence | 96.20% | Date | Thu Jan 5 10:57:09 GMT 2012 |
Rank | 179 | Aligned Residues | 115 |
% Identity | 19% | Template | c3oa3A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:aldolase; |
PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 coccidioides immitis
|
Resolution | 1.60 Å |
|
 |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | |
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | |
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | I | Y | L | A | R | Y | Y | Q | A | . |
. |
. |
D | A | C | L | L | M | L | S | V | L | D | D | . |
. |
. |
. |
. |
. |
D | Q | Y | R | Q | L | A | A | V | A | H | S | L | E | M | G | V | L | T | E | V | S | . |
. |
N | E | E | E | Q | E | R | A | . |
. |
. |
. |
I | A | L | G | A | K | V | V | G | I | N | N |
Query Conservation |   |
  |
|
|   |
|
|   |   |   |
|
| . | . | . |
|
|
|
|
|
|   |   |   |
|   |   | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|
| . | . |   |   |   |
|
|   |   |
| . | . | . | . |   |   |   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | E | A | K | R | A | M | Q | N | G | A | S | E | L | D | M | V | M | N | Y | P | W | L | S | E | K | R | Y | T | D | V | F | Q | D | I | R | A | V | R | L | A | A | K | D | A | I | L | K | V | I | L | E | T | S | Q | L | T | A | D | E | I | I | A | G | C | V | L | S | S | L | A | G | A | D | Y | V | K | T | S | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | L | R | D | L | S | I | D | L | N | R | T | R | E | L | A | . |
. |
. |
P | K | L | G | H | N | V | T | V | I | S | E | S | G | I | N | T | Y | A | Q | V | . |
R | E | L | S | H | F | A | N | G | F | L | I | G | S | A |
Query Conservation |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   | . | . | . |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   | . |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
. |
|
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|   | . | . |
|
|
|
|
|
Template Sequence |   |
. |
G | F | N | G | P | G | A | S | I | E | N | V | S | L | M | S | A | V | C | D | S | L | Q | S | E | T | R | V | K | A | S | G | G | I | R | T | I | E | D | C | V | K | M | V | R | A | G | A | E | . |
. |
R | L | G | A | S |
Template Known Secondary structure |   |
. | S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . |  |  |  |  | S |
Template Predicted Secondary structure |   |
. |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
. | . | 240 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|