Job Description P00909 Confidence 97.93% Date Thu Jan 5 10:57:09 GMT 2012 Rank 141 Aligned Residues 144 % Identity 12% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																		.	.								.	.	.																																														.	.	.	.	.	.	.
Query SS confidence																		.	.								.	.	.																																														.	.	.	.	.	.	.
Query Sequence		F	N	F	L	P	I	V	S	Q	I	A	P	Q	P	I	L	.	.	C	K	D	F	I	I	D	.	.	.	P	Y	Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	.	.	.	.	.	.	.
Query Conservation																		.	.								.	.	.																																														.	.	.	.	.	.	.
Alig confidence												.						.	.								.	.	.																					.																									.	.	.	.	.	.	.
Template Conservation												.																																						.
Template Sequence		P	D	F	V	R	E	L	H	K	R	.	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A	E	L	G	V	W	M	V	N	V	H	A	S	.	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S
Template Known Secondary structure											T	.	T											S																T		S						G	G	.	G													G	G	G	G	G	G	S								S		T	T
Template Predicted Secondary structure												.																																						.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		165	.	.	.	.	170																		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		S	N	E	E	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	.	.	.	.	G	I	N	T	Y	A	Q	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	.	.	.	.	.	.	.	.	.	.	V	C	S	A	Q	E	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A
Template Known Secondary structure										T	T			S																T	T					.	.	.	.	.	.	.	.	.	.				T	T	T										T	T	S												T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	I	A	S	G	S	D	Y	L	V	I	G	R	P	I	T	Q	A	A	H	P	E	V	V	L	E	E	I
Template Known Secondary structure							T		S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions