Job Description P00909 Confidence 95.68% Date Thu Jan 5 10:57:09 GMT 2012 Rank 185 Aligned Residues 152 % Identity 14% Template c3fs2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																			.														.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																			.														.	.	.	.	.	.	.
Template Sequence		K	A	L	E	V	F	S	D	L	K	K	E	Y	G	F	P	V	L	T	D	I	H	T	E	E	Q	C	A	A	V	A	P	V	.	V	D	V	L	Q	I	P	A	F	L	C	R	Q	.	.	.	.	.	.	.	T	D	L	L	I	A	A	A	R	T	G	R	V	V	N	V	K	K	G	Q	F	L	A	P	W	D
Template Known Secondary structure																								S								T	T	T	.		S						G	G	G	T	T		.	.	.	.	.	.	.										T	T	S								T	T			G	G	G
Template Predicted Secondary structure																																			.														.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
			220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.	.	.	.	270	.	.	.	.	.	.	.			.
Predicted Secondary structure		.										.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.
Query SS confidence		.										.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.
Query Sequence		.	Y	A	Q	V	R	E	L	S	H	.	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	.	.	.	.	.	.	.	.	A	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T	R	.	.	.	.	.	.	.	.	.	G	Q	D	A	K	A	A	Y	D	A	G	A	I	.	.	Y
Query Conservation		.										.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.
Alig confidence		.										.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		M	K	N	V	L	A	K	I	T	E	S	G	N	P	N	V	L	A	T	E	R	G	V	S	F	G	Y	N	T	L	V	S	D	M	R	A	L	P	I	M	A	G	L	G	A	P	V	I	F	D	A	T	H	S	V	Q	Q	P	G	Q	R	E	F	V	E	T	L	A	R	A	A	V	A	V	G	V	A	G	F	F
Template Known Secondary structure											T	T	T														S	S	S						T	T							T	T	T	S										T						G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		279	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		G	G	L	I	F	.	.	.	.	.	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		I	E	T	H	E	D	P	D	N	A	P	S	D	G	P	N	M	V	P	I	D	K	M	P	A	L	L	E	K	L
Template Known Secondary structure						S	S	G	G	G		S	S	S	G	G	G				G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions