Job Description P00909 Confidence 89.48% Date Thu Jan 5 10:57:09 GMT 2012 Rank 227 Aligned Residues 179 % Identity 13% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.													.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	F	R	A	A	V	A	A	E	Q	P	L	Q	V	V	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D
Template Known Secondary structure											S	S	S							S	S										T	T		S																S		S	S	S																				S							T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		215	.	.	.	.	220	.	.	.		.	.	.	.	.					.	230	.	.	.	.	.														.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure											.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence											.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		S	G	I	N	T	Y	A	Q	V	.	R	E	L	S	H	.	.	.	.	F	A	N	G	F	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V	L	.	.	.	.	L	G	E	N	K	V	C	G	L	T	R	.	.	.	.	.	.	.	.
Query Conservation											.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence											.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D
Template Known Secondary structure		T		S	S	S														T	T		S							B						T	T							B																		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
				265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure		.	.																																																	.	.
Query SS confidence		.	.																																																	.	.
Query Sequence		.	.	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	.	.	N	H	D	I	A	D	V	V	D	K	A	K	V	L	S	L	A	A	V
Query Conservation		.	.																																																	.	.
Alig confidence		.	.																		.	.	.	.					.	.																						.	.
Template Conservation																					.	.	.	.					.	.
Template Sequence		A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	.	.	.	.	E	A	M	K	.	.	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A
Template Known Secondary structure														T		S					.	.	.	.					.	.	S													S		B						T	T	S	S	S											T	T
Template Predicted Secondary structure																					.	.	.	.					.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions