Job Description P00909 Confidence 94.79% Date Thu Jan 5 10:57:09 GMT 2012 Rank 199 Aligned Residues 156 % Identity 19% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T	R	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	V	L
Query Conservation
Alig confidence									.	.	.	.																									.							.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																									.							.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	L	H	A	L	L	.	.	.	.	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	.	F	D	T	W	G	G	.	V	L	T	G	R	D	Y	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E
Template Known Secondary structure									.	.	.	.																	T	T		S					.			T	T	G	G	.	G	S								.	.	.	.	.	.	.	.	.	.	.	.		T											S		S
Template Predicted Secondary structure									.	.	.	.																									.							.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.		.	.	.	.	.	.	.	220	.													.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		327	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		S	L	A	.	.	.	.	A	V	Q	L	H	G	N	E	E	Q	L	Y	I	D	T	L	R	E	A	L	P	A	H	V	A	I	W	K	A	L	S	V	G	E	T	L	P	A	R	E	F	Q	H	V	D	K	Y	V	L	D	N	G	Q	G	G	S	G	Q	R	F	D	W	S	L	L	N	G	Q	S	L	G	N	V
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		N	D	G	R	R	V	P	V	T	L	F	T	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	.	.	.	.	.	.	.	D	I	A	D	A	R	R	R	V	G	N	K	V
Template Known Secondary structure			T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T						T	T	S		S						T	T	S	.	.	.	.	.	.	.										T	T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.																									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.
		403	.	.	.	.	.								.	410	.	.	.	.	.	.	.	.		.						420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure								.	.	.	.	.	.	.											.		.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.											.		.	.	.	.	.
Query Sequence		L	L	A	G	G	L	.	.	.	.	.	.	.	G	A	D	N	C	V	E	A	A	Q	.	T	.	.	.	.	.	G	C	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	A	S	V	F	Q	T	L	R	A	Y
Query Conservation								.	.	.	.	.	.	.											.		.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.											.		.	.	.	.	.																		.
Template Conservation																																																	.
Template Sequence		A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	.	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L
Template Known Secondary structure							B		G	G	G	G	G	S														T	T	T	T	T	S	S				B		B	S	S				T	T	S	.
Template Predicted Secondary structure																																																	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions