Job Description P00909 Confidence 91.35% Date Thu Jan 5 10:57:09 GMT 2012 Rank 214 Aligned Residues 176 % Identity 13% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.				.
Predicted Secondary structure																			.	.	.	.	.																																																							.	.	.
Query SS confidence																			.	.	.	.	.																																																							.	.	.
Query Sequence		G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	.	.	.	.	.	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	V	L	S	L	A	A	V	Q	L	H	G	.	.	.	N
Query Conservation																			.	.	.	.	.																																																							.	.	.
Alig confidence																			.	.	.	.	.						.	.																.									.																							.	.	.
Template Conservation																													.	.																.									.
Template Sequence		N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	.	.	F	T	V	G	A	I	G	I	K	Y	F	P	T	H	C	.	F	K	D	V	H	L	X	V	.	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H
Template Known Secondary structure											T	T										B	S	S	S	S	S		.	.	B		B		T					T	S		T	T	S	.									.	S												T	T		S						T	T		T	T
Template Predicted Secondary structure																													.	.																.									.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.									.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.												.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																	.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																																	.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	Q	L	Y	I	D	T	L	R	E	A	.	.	.	.	.	.	.	.	L	P	A	H	V	A	I	W	K	A	L	S	V	G	E	T	L	P	A	R	E	F	Q	H	V	D	K	Y	V	L	D	N	.	G	Q	G	G	S	G	Q	R	F	D	W	S	L	L	.	.	.	.	.	.	.	.	.	.	.	N	G
Query Conservation														.	.	.	.	.	.	.	.																																	.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R
Template Known Secondary structure		S									T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T		S						S			T	T	T	T																				G	G	G
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		Q	S	L	G	N	V	L	L	A	G	G	L	G	A	D	N	C	V	E	A	A	Q	T	G	C	.	.	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	A	S	V	F	Q	T	L	R	A
Query Conservation																											.	.
Alig confidence																											.	.														.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G	E	.	.	.	.	.	.	.	L	K	T	N	L	K	V	W	K	S
Template Known Secondary structure		G	G	G							S	S												S	S	S									G	G	G	G	S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions