Job Description P00909 Confidence 38.89% Date Thu Jan 5 10:57:09 GMT 2012 Rank 481 Aligned Residues 120 % Identity 13% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.
Predicted Secondary structure																								.	.	.	.																					.	.	.	.	.	.																			.	.	.
Query SS confidence																								.	.	.	.																					.	.	.	.	.	.																			.	.	.
Query Sequence		K	A	S	P	S	K	G	V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	.	.	.	.	K	H	Y	A	S	A	I	S	V	L	T	D	E	K	Y	F	Q	G	S	F	.	.	.	.	.	.	N	F	L	P	I	V	S	Q	I	A	P	Q	P	I	L	C	K	D	.	.	.	F	I	I	D	P	Y	Q
Query Conservation																								.	.	.	.																					.	.	.	.	.	.																			.	.	.
Alig confidence													.											.	.	.	.																					.	.	.	.	.	.																			.	.	.
Template Conservation													.
Template Sequence		V	P	T	K	A	D	N	P	A	V	P	.	I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A
Template Known Secondary structure		S			T	T	T		T	T			.		S															T											T	T	S																				S	T	T									T	T	T			G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	.	.	.	.	.	.	.	.	.	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	G	X	L	P	L	K	P	D	X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X
Template Known Secondary structure		G	G	T	T	G	G	G			S							S					S	S	S																				T								S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions