Job Description P00909 Confidence 85.10% Date Thu Jan 5 10:57:09 GMT 2012 Rank 234 Aligned Residues 142 % Identity 14% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

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		101	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.
Predicted Secondary structure												.																																				.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence												.																																				.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		P	I	V	S	Q	I	A	P	Q	P	.	I	L	C	K	D	F	I	I	D	P	Y	Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	.	.	.	.	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	.	.	.	.	.	.	.	S	N	E	E
Query Conservation												.																																				.	.	.	.																				.	.	.	.	.	.	.
Alig confidence												.																																				.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	C	E	R	Y	P	H	I	P	V	A	L	H	L	D	H	G	T	T	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A	E	L	G	R	L	M	G	I	L	V	N	P	K
Template Known Secondary structure							S	T	T	S											S											T		S							T	T	S																			T	T								S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		169	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																					220
Predicted Secondary structure									.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	E	R	A	I	A	.	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	.	.	.	.	.	.	.	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation									.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	E	Q	F	V	K	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K	L	D	F	E	R	L	Q	E	V	K	R	L	T	N	I	P	L	V	L	H	G	A	S	A	I	P	D	N	V	R	K	S	Y	L	D	A	G	G	D	L	K	G	S	K	G	V	P	F
Template Known Secondary structure													S						S	S			S	S	S	B			S	S	S																	S						S															T	T				T	T		B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		221	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	Q	V	R	E	L	.	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		E	F	L	Q	E	S	V	K	G	G	I	N	K	V	N	T	D	T	D	L	R	I	A
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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