Job Description P00909 Confidence 39.16% Date Thu Jan 5 10:57:09 GMT 2012 Rank 478 Aligned Residues 155 % Identity 12% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.		.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																		.	.	.	.							.
Query SS confidence																																									.	.	.	.																		.	.	.	.							.
Query Sequence		E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	.	.	.	.	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	.	.	.	.	V	R	E	L	S	H	.	F	A	N	G	F	L	I	G	S
Query Conservation																																									.	.	.	.																		.	.	.	.							.
Alig confidence																																									.	.	.	.																		.	.	.	.							.
Template Conservation
Template Sequence		S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A	S	I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	I	T
Template Known Secondary structure											T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	L	M	A	H	D	D	L	H	A	A	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T	R	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	.	R	N	H	D	I
Query Conservation																																																																												.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.									.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	.	.	D	K	N	I	V	A	V	K	E	A	S	G	N	I
Template Known Secondary structure				S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T			S												S												T	T	.	.	S	S	S								S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	V	D	K	A	K	V	L	S	L	A	A	V	Q	L	H	G	N	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S	G	N	D	D
Template Known Secondary structure												G	G	G						S		G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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