 |
Job Description | P00909 | Confidence | 46.87% | Date | Thu Jan 5 10:57:09 GMT 2012 |
Rank | 420 | Aligned Residues | 25 |
% Identity | 32% | Template | c3bboD_ |
PDB info |
PDB header:ribosome | Chain: D: PDB Molecule:ribosomal protein l1; |
PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
|
Resolution | 9.40 Å |
|
  |   |
256 | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | K | V | C | G | L | T | R | G | Q | D | A | K | A | A | Y | D | A | G | A | I | Y | G | G |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
Template Sequence |   |
T | V | K | I | A | V | L | A | Q | G | D | K | I | D | E | A | K | A | A | G | A | D | I | V | G |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |
|
| T | T | T | T |  |  |  |  | T | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|