Job Description P00909 Confidence 98.73% Date Thu Jan 5 10:57:09 GMT 2012 Rank 90 Aligned Residues 180 % Identity 13% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.											.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																	.											.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		I	R	D	D	F	D	P	A	R	I	A	A	I	Y	K	.	H	Y	A	S	A	I	S	V	L	T	.	.	.	.	.	.	.	.	.	.	.	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	P	Q	P	I	L	C	K	.	.	D	F	I	I	D	P	Y	Q	I	Y	L	A	R	Y	Y
Query Conservation																	.											.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																	.											.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		L	V	K	G	Y	G	L	K	E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y
Template Known Secondary structure		G	T	T	T													T	T		S														S	S	S							T														S	S							S	S	S													T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A
Template Known Secondary structure		T									B	T	S	B													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T								T	T	T		S		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																																				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
							202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																							.																					.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																							.																					.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	.	R	E	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	.	.	.	.	.	.	.	.	D	L	H	A	A	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T	R	G	Q	D
Query Conservation		.	.	.	.	.																							.																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																							.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G	A	D	I	A	G	M	A	L	P	V	L	K	S	A	I	E	G	K	E	S	L	E	Q	F	F	R	K	I	I	F	E	L	K	A	A	M	M	L	T	G	S	K	D	V	D	A
Template Known Secondary structure											S	T	T							S	S			S											T		S																																					T	T			B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		268													.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	Y	D	A	G	A	I	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	K	T	S	I	V	I	L	G	K	L	K	E	W	A	E	Y	R	G	I	N	L
Template Known Secondary structure			T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions