Return to main results Retrieve Phyre Job Id

Job DescriptionP00909
Confidence52.49%DateThu Jan 5 10:57:09 GMT 2012
Rank386Aligned Residues101
% Identity17%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  LMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISES
Query Conservation 

   
    
  
   
  


  




   

  
    
 








 
   
      
    
     



Alig confidence 






















































.........















Template Conservation 
 
 
             
                          
         .........  
      
  
  
Template Sequence  VIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNIIP. . . . . . . . . ELVEGCKKNGVKLFPW
Template Known Secondary structure  S

TTS
S

SSTTT
SBGGG

.........TTT


B
Template Predicted Secondary structure 

















.........


Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200. ........210.......
 
   216...220........ .230.........240.........250..
Predicted Secondary structure 



.







Query SS confidence 












.























Query Sequence  GINTYAQVRELSH. FANGFLIGSALMAHDDLHAAVRRV
Query Conservation 

    
      .
 





  

   

      
Alig confidence 












.





.......










Template Conservation 


       
   




 .......

 
      
Template Sequence  TVDRKEDMERMIKAGVDGII. . . . . . . TDDPETLINLV
Template Known Secondary structure 


ST
S.......S
Template Predicted Secondary structure 







.......


Template SS confidence 





































   218.220.........230....... ..240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions