Job Description P00909 Confidence 76.08% Date Thu Jan 5 10:57:09 GMT 2012 Rank 279 Aligned Residues 105 % Identity 17% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																		.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	G	A	K	V	V	G	I	.	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.
Template Conservation																																																																						.
Template Sequence		S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E	N	I	D	L	N	Y	P	N	L	V	V	A	Y	E	P	I	W	A	I	G	T	S	.	A	S	L	E	D	I	Y	L	T	H	G
Template Known Secondary structure																T	T																														T	T	S		T	T		T	T								G	G	G	T	T			.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.
		204	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure						.	.	.	.																						.
Query SS confidence						.	.	.	.																						.
Query Sequence		K	L	G	H	.	.	.	.	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	.	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R
Query Conservation						.	.	.	.																						.
Alig confidence						.	.	.	.																						.													.	.	.
Template Conservation																																												.	.	.
Template Sequence		F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	S	A	S	W	.	.	.	E	L	E	N	F	K	T
Template Known Secondary structure				T	T	T	S		T	T	S						S	S			T	T	T						T	S	T	T								G	G	G	G	.	.	.	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions