Return to main results Retrieve Phyre Job Id

Job DescriptionP00909
Confidence44.05%DateThu Jan 5 10:57:09 GMT 2012
Rank441Aligned Residues90
% Identity21%Templatec1iq8B_
PDB info PDB header:transferaseChain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220 ........ .230........ .240.........250... ....
Predicted Secondary structure 













....



..




.....


Query SS confidence 































. . .







.









. .














. . . . .



Query Sequence  RDLSIDLNRTRELAPKLGHNVTVISESGINTY. . . AQVRELSH. FANGFLIGSA. . LMAHDDLHAAVRRVL. . . . . LGEN
Query Conservation   
   
      
    
     





   ... 
      .
 





  ..

   

      
 .....    
Alig confidence 































...







.









..














.....



Template Conservation   

 

 
            
 





   


  

  
      
 




           

  
      

  
Template Sequence  KELEITLSRAREAEEIKEIPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPD
Template Known Secondary structure 

S


B

TT
S

SB
S
TT
TS
TT
Template Predicted Secondary structure 


























Template SS confidence 















































































   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   258 .260.........270........
Predicted Secondary structure  ...









Query SS confidence 
. . .



















Query Sequence  K. . . VCGLTRGQDAKAAYDAGAIY
Query Conservation 
...




  


      


 
Alig confidence 
...



















Template Conservation 




 


 
  
   
 



 
Template Sequence  RPVHLFGAGHPIVFALAVAMGVDL
Template Known Secondary structure  S
TT

SGGGTT

Template Predicted Secondary structure 











Template SS confidence 























   224.....230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions