Job Description P00909 Confidence 46.48% Date Thu Jan 5 10:57:09 GMT 2012 Rank 423 Aligned Residues 147 % Identity 12% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	K	V	V	G	I	N	N	R	D
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	F	V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G	T	A	E
Template Known Secondary structure										T																										T	T								T	T	T					S		T	T	S															T		S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Query Sequence		L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	.	F	A	N	G	F	.	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Alig confidence				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Template Conservation				.
Template Sequence		G	G	.	K	W	D	V	I	Q	N	A	R	I	L	R	E	S	H	Y	K	P	D	E	N	D	V	F	H	L	E	Q	K	F	Y	S	I	K	A	A	F	P	T	S	S	G	G	L	H	P	G	N	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q	L	G	G	G	T	L	G	H	P	D	G	P	A	A
Template Known Secondary structure		T		.														S						T	T			S							T	T										S	S			T	T	T								T		S	S	S					S					S		T	T
Template Predicted Secondary structure				.
Template SS confidence
		325	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
			249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	R	R	V	L	L	G	E	N	K	V	C	G	L	T	R	G	Q	D	A	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	A	R	A	V	R	Q	A	I	D	A	I	M	Q	G	I	P	L	D	E	Y	A
Template Known Secondary structure														T	S	S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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