Job Description P00909 Confidence 47.37% Date Thu Jan 5 10:57:09 GMT 2012 Rank 416 Aligned Residues 129 % Identity 16% Template c1bwvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate Resolution 2.40 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	K	V	V	G	I	N	N	R	D
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	.	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V
Template Known Secondary structure									T	T		S						G	.	G	G															T	T								T	T	T					S		T	T	S															T		S							S	S
Template Predicted Secondary structure																			.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Query Sequence		L	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	.	F	A	N	G	F	.	L	I	G	S	A	L	M	A	H	D	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.						.
Template Conservation		.
Template Sequence		.	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	D
Template Known Secondary structure		.	S	S	S																	S					B	T	T	T	T	B		S					T	T										S	S			T	T	S										S	S						S					T		T	T
Template Predicted Secondary structure		.
Template SS confidence
			333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
			245	.	.	.	.	250	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	H	A	A	V	R	R	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	I	Q	A	G	A	T	A	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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