Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC0
Confidence99.60%DateThu Jan 5 11:22:58 GMT 2012
Rank71Aligned Residues117
% Identity17%Templatec2v8qE_
PDB info PDB header:transferaseChain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1; PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330.........340.........350.........360..... ....370..
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Query Sequence  MTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAA. . . . . . . . . . . IASASPA
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Template Sequence  IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK. GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGV
Template Known Secondary structure 
SB
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TT
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TT.SBGGGTGGGGGSS




SSBGGG

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   197..200.........210.........220.........230... ......240.........250.........260.........270.....
 
   373......380.........390.........400.........410.........420.
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Query Sequence  IIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGE
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Template Sequence  LKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT
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TTSBT
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TTSBSS
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   276...280.........290.........300.........310.........320....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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