Job Description P0AEC0 Confidence 99.63% Date Thu Jan 5 11:22:58 GMT 2012 Rank 68 Aligned Residues 176 % Identity 12% Template c2qlvF_ PDB info PDB header:transferase/protein binding Chain: F: PDB Molecule:nuclear protein snf4; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		E	G	A	F	A	E	E	E	R	Y	M	I	N	G	V	L	T	L	.	A	S	R	S	L	R	G	I	M	T	P	R	G	E	I	S	W	V	D	A	N	L	G	V	D	E	I	R	E	Q	L	L	S	S	P	H	S	L	F	P	V	C	R	G	E	L	D	E	I	I	G	I	V	R	A	K	E	L	L	V	A
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		Q	E	K	V	S	I	E	Q	Q	L	A	V	E	S	I	R	K	F	L	N	S	K	T	S	Y	D	V	L	P	V	S	Y	R	L	I	V	L	D	T	S	L	L	V	K	K	S	L	N	V	L	L	Q	N	S	I	V	S	A	P	L	W	D	S	K	T	S	R	F	A	G	L	L	T	T	T	D	F	I	N	V
Template Known Secondary structure		T	T																			T		B	G	G	G	G	S		S	S								T	T	S	B											T	T		S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.																					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	E	G	V	D	V	A	A	I	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	A	I	I	V	P	E	T	L	D	P	I	N	L	L	G	V	L	R	R	A	R	G	S	F	V	I	V	T	N	E	F	G	V	V	Q	G	L	V	T	P	L	D	V	L	E
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	Y	Y	F	S	N	P	D	K	F	E	L	V	D	K	L	Q	L	D	G	L	K	D	I	E	R	A	L	G	V	D	Q	L	D	T	A	S	I	H	P	S	R	P	L	F	E	A	C	L	K	M	L	E	S	R	S	G	R	I	P	L	I	D	Q	R	E	I	V	V	S	V	L	T	Q	Y	R	I	L	K
Template Known Secondary structure										S							S		B	S	T	T								S	S									B		T	T	S	B									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.							.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		A	I	A	G	E	F	P	D	A	D	E	T	P	E	I	I	T	D	.	.	.	.	.	.	G	D	G	W	L	V	K	G	G	T	D	L	H	A	L	Q	Q	A	L
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	A	L	N	C	R	E	T	H	F	L	K	I	P	I	G	D	L	N	I	I	T	Q	D	N	M	K	S	C	Q	M	T	T	P	V	I	D	V	I	Q	M	L
Template Known Secondary structure								G	G	G	G	G			S	B	G	G	G	T	T	T	S	B		S	S				B		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions