Job Description P45564 Confidence 3.84% Date Thu Jan 5 12:03:17 GMT 2012 Rank 31 Aligned Residues 179 % Identity 9% Template d2zfga1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.59

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	G	F	F	D	W	E	N	F	Y	N	G	R	H	N	K	P	G	S	E	Q	R	Y	T	F	K	N	T	N	R	I	Y	L	G	D	T	G	F	N	L	Y	L	H	A	Y	G	T	Y	G	S	A	N	R	V	N	F	H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	F	A	V	Q	Y	L	G	K	N	E	R	D	T	A	R	R	S	N	G	D	G	V	G	G	S	I	S	Y	E	Y	E	G	F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	K	A	E	Q	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	A	N
Template Known Secondary structure												B			S	S	S	T	T		B													T	T																		T	S	S	B				S														T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		F	A	K	R	Y	T	D	Q	T	Y	Y	T	G	D	N	G	.	.	.	.	.	.	.	.	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A	G	N	G	G	K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.												.	.	.																													.	.
Template Conservation																																					.	.	.																													.	.
Template Sequence		Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	T	S	G	F	A	N	K	T	Q	D	V	L	L	V	A	Q	Y	Q	F	.	.	.	D	F	G	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	G	I	G	D	V	D	L	V	N	.	.	Y	F	E	V	G	A	T	Y	Y	F	N	K
Template Known Secondary structure							S		S					T	T	T	T						S														.	.	.	T	T	S																T	T	T								.	.												T
Template Predicted Secondary structure																																					.	.	.																													.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		H	I	T	T	G	I	Q	Y	R	Y	A	D	.	.	.	D	K	L	G	E	D	F	Y	Q	D	A	I	I	Y	S	I	K	F	N	F
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		N	M	S	T	Y	V	D	Y	I	I	N	Q	I	D	S	D	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q	F
Template Known Secondary structure		T														T	T		T	T					B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions