Job Description P45564 Confidence 1.24% Date Thu Jan 5 12:03:17 GMT 2012 Rank 83 Aligned Residues 187 % Identity 11% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	A	D	I	G	V	H	Y	L	D	W	T	S	R	T	T	E	K	S	S	T	K	S	H	K	D	D	F	G	Y	L	E	F	E	G	G	A	N	F	S	W	G	E	M	Y	G	F	F	D	W	E	N	F	Y	N	G	R	H	N	K	P	G	S	E	Q	R	Y	T	F	K	N	T	N	R	I	Y	L	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																																														.	.	.
Template Conservation																											.	.	.	.	.	.	.																																														.	.	.
Template Sequence		F	G	G	F	N	A	G	F	G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	.	.	.	.	.	.	.	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	.	.	.
Template Known Secondary structure		B	T	T											T	T			B	T	T	B	S	S	T	T	.	.	.	.	.	.	.												S	S															T	T																	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	G	F	N	L	Y	L	H	A	Y	G	T	Y	G	S	A	N	R	V	N	F	H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	Y	T	G	D	N	G	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T
Query Conservation
Alig confidence		.	.																																							.															.																	.	.	.				.	.
Template Conservation		.	.																																							.															.																	.	.	.				.	.
Template Sequence		.	.	G	V	A	K	L	S	G	L	L	Q	Q	T	K	F	K	R	D	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	.	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	.	I	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	.	.	.	S	K	R	.	.
Template Known Secondary structure		.	.	S	S															T	T	S																	T	T	T	.													G	G	.	G	T														S	.	.	.	S	S	S	.	.
Template Predicted Secondary structure		.	.																																							.															.																	.	.	.				.	.
Template SS confidence
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	N	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A	G	N	G	G	K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A
Template Known Secondary structure															T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions