Job Description P45564 Confidence 95.95% Date Thu Jan 5 12:03:17 GMT 2012 Rank 2 Aligned Residues 118 % Identity 13% Template d1qjpa_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	Y	T	G	D	N	G	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	W	N	E	Y	E	F	D	.	R	D	A	T	Y	A	A	G	N	G	G
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T
Template Known Secondary structure																		T	T																																S	S	S	S																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y	R	Y	A	D	D	K	L	G	E	D	F	Y	Q	D	A	I	I	Y	S	I	K	F	N	F
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	.	.	.	.	.	.	.	.	.	T	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure																	T	T										.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions