Job Description P45564 Confidence 94.76% Date Thu Jan 5 12:03:17 GMT 2012 Rank 4 Aligned Residues 113 % Identity 12% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	Y	T	G	D	N	G	.	.	.	.	.	.	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	.	.	.	.	.	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A
Query Conservation																																			.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.												.	.	.									.	.	.	.	.
Template Conservation																																																				.	.	.
Template Sequence		F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	.	.	.	N	D	W	A	S	I	Y	G	V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N
Template Known Secondary structure											T	T		S																	T	T	S																			.	.	.		T	T																			T	T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	N	G	G	K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y	R	Y	A	D	D	K	L	G	E	D	F	Y	.	Q	D	A	I	I	Y	S	I	K	F	N	F
Query Conservation																																										.
Alig confidence					.																													.	.	.	.					.
Template Conservation					.																													.	.	.	.
Template Sequence		D	T	S	.	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	.	.	.	.	I	R	S	V	D	V	G	T	W	I	A	G	V	G	Y	R	F
Template Known Secondary structure					.														S	S	T	T												.	.	.	.		T	T
Template Predicted Secondary structure					.																													.	.	.	.
Template SS confidence
		101	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions