Job Description P45564 Confidence 2.65% Date Thu Jan 5 12:03:17 GMT 2012 Rank 45 Aligned Residues 197 % Identity 13% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		P	V	V	S	H	A	E	F	K	G	G	F	A	D	I	G	V	H	Y	L	D	W	T	S	R	T	T	E	K	.	S	S	T	K	S	H	K	D	D	F	G	Y	L	E	F	E	G	G	A	N	F	S	W	G	E	M	Y	G	F	F	D	W	E	N	F	Y	N	G	R	H	N	K	P	G	S	E	Q	R	Y	T
Query Conservation																															.
Alig confidence																															.																					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	T	L	S	F	T	P	D	N	I	N	A	D	I	S	L	G	T	L	S	G	K	T	K	E	R	V	Y	L	A	E	E	G	G	R	K	V	S	Q	L	D	W	K	F	N	N	A	A	I	.	.	.	.	.	I	K	G	A	I	N	W	.	.	.	.	.	.	.	.	.	.	.	D	L	M	P	Q	I	S
Template Known Secondary structure		T	T						T	T																						T	T	T	T	T																.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.												.	60	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		F	K	N	T	N	R	I	Y	L	G	D	T	G	F	N	L	Y	L	H	A	Y	G	T	Y	G	S	A	N	R	V	N	F	.	.	.	.	.	.	.	.	H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	.	.	.	.	.	.	.	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y
Query Conservation																																		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence															.	.	.	.																.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		I	G	A	A	G	W	T	T	L	G	S	R	G	.	.	.	.	G	N	M	V	D	Q	D	W	M	D	S	S	N	P	G	T	W	T	D	E	A	R	H	P	D	T	Q	L	N	Y	A	N	E	F	D	L	N	I	K	G	W	L	L	N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F
Template Known Secondary structure										S	S				.	.	.	.											T	T	S	T	T	S		S																												S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		161	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																										.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure														.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	G	D	N	G	Y	V	A	G	W	V	.	.	.	.	.	.	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	N	E	Y	E	F	D	R	D	A	T	Y	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	F	E	L	G	G	T	F	K	Y	S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T
Template Known Secondary structure		.									B			T	T		S	S		B			B			T	T		S																						T	T																								S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
			201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	A	G	N	G	G	K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y	R	Y	A	D
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R
Template Known Secondary structure																								T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions