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Job DescriptionP45564
Confidence95.68%DateThu Jan 5 12:03:17 GMT 2012
Rank3Aligned Residues114
% Identity11%Templatec3nb3C_
PDB info PDB header:virusChain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components
Resolution19.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   128.130.........140.........150.........160.........170.........180........ .190.........200..
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Query Sequence  HDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLGSEKFTLTN. . . . . WNEYEFDRDATYAA
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Template Sequence  HENKLGAGAFGGYQVNPYVGFEMGYDWLGRMPYAYKAQGVQLTAKLGYPI. . . TDDLDIYTRLGGMVWRADTYSNVYGKN
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   31........40.........50.........60.........70.........80 .........90.........100.......
 
   203......210.........220.........230.........240.........250....
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Query Sequence  GNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGEDFYQDAIIYSIKFNF
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Template Sequence  HDT. GVSPVFAGGVEYAITPEIATRLEYQWTN. . . . . . . . . GMLSLGVSYRF
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   115.. ..120.........130.........140..... ....150......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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