Return to main results Retrieve Phyre Job Id

Job DescriptionP45564
Confidence93.90%DateThu Jan 5 12:03:17 GMT 2012
Rank5Aligned Residues114
% Identity18%Templatec3aehB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.. .......150.........160 .........170.........180.........190.........200.........210
Predicted Secondary structure  .





..

























Query SS confidence 








.

















. .

















































Query Sequence  YGIGYNFTG. SGWWFKPFFAKRYTDQTY. . YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGL
Query Conservation   
 
 
  
.
 
               ..    

 
 
     

  
   
   
  
  
 
 
            
Alig confidence 








.

















..












































.....
Template Conservation   
 

   
     
 
   
 
          
     
                       
           .....
Template Sequence  AEVGYRYHLTDTTFVEPQAELVWGRLQGQNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYEFDLTDSRKDSRM. . . . .
Template Known Secondary structure 
TT




SSS


.....
Template Predicted Secondary structure 





















.....
Template SS confidence 















































































   1230.........1240.........1250.........1260.........1270.........1280.........1290.........1300....
 
   211........220.........230.........240.........250....
Predicted Secondary structure 



















Query SS confidence 











































Query Sequence  NGAVALWWNATSHITTGIQYRYADDKLGEDFYQDAIIYSIKFNF
Query Conservation     
         
  






 

 
  
         

 
Alig confidence 





















..



















Template Conservation     

          
      ..  
           



 
Template Sequence  LYGVGLNARFGDNTRLGLEVER. . SAFGKYNTDDAINANIRYSF
Template Known Secondary structure  TTT..S
SS
Template Predicted Secondary structure 


..




Template SS confidence 











































   1336...1340.........1350....... ..1360.........1370.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions