Job Description P45564 Confidence 2.75% Date Thu Jan 5 12:03:17 GMT 2012 Rank 43 Aligned Residues 122 % Identity 8% Template c3a2rX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis Resolution 2.30 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	.	.	.	Y	T	G	D	N	G	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A	G	N	G	G
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		D	Y	Q	V	H	R	V	V	A	G	Y	D	A	N	D	L	Y	V	S	V	A	G	Q	Y	E	A	A	K	N	N	E	V	G	S	I	K	G	K	K	H	E	Q	T	Q	V	A	A	T	A	A	Y	R	F	G	N	V	T	P	R	V	S	Y	A	H	G	F	K	A	K	V	N	G	V	K	D	A	N	Y	Q	Y
Template Known Secondary structure															T	T																S	S	S	T	T	T	T																B	T	T																T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y	R	Y	A	D	D	K	L	G	E	D	F	Y	.	Q	D	A	I	I	Y	S	I	K	F	N	F
Query Conservation																																						.
Alig confidence		.	.	.																																		.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	Q	V	I	V	G	A	D	Y	D	F	S	K	R	T	S	A	L	V	S	A	G	W	L	K	Q	G	K	G	A	G	K	V	E	Q	T	A	S	M	V	G	L	R	H	K	F
Template Known Secondary structure		.	.	.											S	S	S	S													S	S	T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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