Job Description P45564 Confidence 1.47% Date Thu Jan 5 12:03:17 GMT 2012 Rank 76 Aligned Residues 155 % Identity 10% Template c2y0hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl Resolution 2.20 Å

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		96	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure														.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	N	T	N	R	I	Y	L	G	D	T	.	G	F	N	L	Y	L	H	A	Y	G	T	Y	G	S	A	N	R	V	N	F	H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	S	G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.
Template Sequence		L	G	L	L	H	T	L	P	L	G	E	G	L	S	L	R	S	D	L	R	Y	F	D	S	G	E	D	G	A	A	I	S	G	P	V	D	N	R	N	L	N	A	M	L	T	L	R	A	G	A	H	A	F	.	.	G	I	G	V	Q	K	M	I	G	N	D	A	F	P	V	L	N	G	Y	T	T	P	Y	V	A
Template Known Secondary structure											S	T	T																T	T		T	T																	T	T				.	.									S	S	S					B	T	T	T		B				T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
											161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	.	.	Y	T	G	D	N	G	Y	V	A	G	W	V	A	G	Y	N	.	F	M	L	G	S	E	K	F	T	L	T	N	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A	G	N	G	G	K	E	G	L	N	G	A	V	A	L	W	W	N	A	T	S	H	I	T	T	G	I	Q	Y
Query Conservation		.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		N	L	M	A	Y	Q	T	F	T	R	P	Q	E	K	S	W	Q	L	R	Y	D	Y	D	F	A	G	L	G	L	P	G	L	N	L	M	T	R	Y	V	Q	G	R	D	I	D	R	G	A	G	R	A	D	D	S	E	W	E	R	N	T	D	L	S	Y	V	I	Q	S	G	P	L	K	S	V	A	L	K	W	R	N
Template Known Secondary structure		T			S	S			S		S	T	T													T	T	T	T		T	T																S	T	T																			S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	A	D	D	K	L	G	E	D	F	Y	Q	D	A	I	I	Y	S	I	K	F	N	F
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		I	T	Y	R	S	R	Y	G	A	D	.	.	L	D	E	N	R	F	I	V	N	Y	T	L
Template Known Secondary structure							S	S	S			.	.
Template Predicted Secondary structure												.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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