Job Description P45564 Confidence 58.24% Date Thu Jan 5 12:03:17 GMT 2012 Rank 13 Aligned Residues 152 % Identity 9% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		G	E	M	Y	G	F	F	D	W	E	N	F	Y	N	G	R	H	N	K	P	G	S	E	Q	R	Y	T	F	K	N	T	N	R	I	Y	L	G	D	T	G	F	N	L	Y	L	H	A	Y	G	T	Y	G	S	A	N	R	V	N	F	H	D	D	M	F	L	Y	G	I	G	Y	N	F	T	G	.	.	.	.	.	S
Query Conservation																																																																												.	.	.	.	.
Alig confidence																								.	.	.	.	.																.																																.	.	.	.	.
Template Conservation																								.	.	.	.	.																.
Template Sequence		F	N	I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	G	L	.	.	.	.	.	A	E	P	S	V	Y	F	N	A	A	N	G	P	W	R	.	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D
Template Known Secondary structure														S	S	S	B	T	T	B	T			.	.	.	.	.												T	T			.													T	T	T	T				S																	S
Template Predicted Secondary structure																								.	.	.	.	.																.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		G	W	W	F	K	P	F	F	A	K	R	Y	T	D	Q	T	Y	Y	T	G	D	N	G	.	.	.	.	.	.	.	Y	V	A	G	W	V	A	G	Y	N	F	M	L	G	S	E	K	F	T	L	T	N	W	N	E	Y	E	F	D	R	D	A	T	Y	A	A	G	N	G	G	K	E	G	L	N	G	A	V	A	L
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.												.	.	.																					.
Template Conservation																																											.	.	.																					.
Template Sequence		D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	.	.	.	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	.	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L
Template Known Secondary structure		S																	S	S		T	T																				.	.	.	S	S	S														S				.						S
Template Predicted Secondary structure																																											.	.	.																					.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		W	W	N	A	T	S	H	I	T	T	G	I	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y
Template Known Secondary structure						S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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