 |
Job Description | P36995 | Confidence | 97.55% | Date | Thu Jan 5 11:54:08 GMT 2012 |
Rank | 18 | Aligned Residues | 56 |
% Identity | 20% | Template | d2ix0a2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.44 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | K | M | T | G | L | V | K | W | F | N | A | D | K | G | F | G | F | I | S | P | V | D | G | S | K | D | V | F | V | H | F | S | A | I | Q | N | D | N | Y | R | T | L | F | E | G | Q | K | V | T | F | S | I | E | S | G | A | K | G | P | A | A | A | N | V | I |
Query Conservation |   |
  |
|   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |   | . | . | . | . |   |
|
|
|
|   |   |
|
| . |   |   |
|
|
|
|
|   |   |   |
|   |   |
| . | . | . | . |   |   | . |
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
Template Sequence |   |
P | R | A | E | G | V | V | K | A | T | . |
. |
. |
. |
E | F | G | F | L | E | V | D | A | . |
Q | K | S | Y | F | I | P | P | P | Q | M | K | K | V | . |
. |
. |
. |
M | H | . |
G | D | R | I | I | A | V | I | H | S | E | R | E | S | A | E | P | E | E | L | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  | T | . | T |  |  |  |  |  |
|  |  |  |  | T | T |
| . | . | . | . |
| T | . | T |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|  |  |  |  |
|
|
| . | . | . | . |
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | |
|
|
|
30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
. | . | |
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|