Return to main results Retrieve Phyre Job Id

Job DescriptionP36995
Confidence99.91%DateThu Jan 5 11:54:08 GMT 2012
Rank2Aligned Residues69
% Identity80%Templated1mjca_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 





























Query SS confidence 




































































Query Sequence  SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIIT
Query Conservation    
  
 

     





  
    


 
 
         
  
  
 
      

  
  
   
Alig confidence 




































































Template Conservation    
  
 

 
   





  
  
 


 
 
 
       
  
  
 
       
  
  
  
Template Sequence  SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
Template Known Secondary structure 


TTTTTTS


GGGB

TTT



TT


SSS

Template Predicted Secondary structure 




























Template SS confidence 




































































   2.......10.........20.........30.........40.........50.........60.........70
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions