Job Description P36995 Confidence 93.32% Date Thu Jan 5 11:54:08 GMT 2012 Rank 25 Aligned Residues 60 % Identity 22% Template c2vnuD_ PDB info PDB header:hydrolase/rna Chain: D: PDB Molecule:exosome complex exonuclease rrp44; PDBTitle: crystal structure of sc rrp44 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.
Predicted Secondary structure																.	.																.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	G	L	V	K	W	F	N	A	D	K	G	F	.	.	G	F	I	S	P	V	D	G	S	K	D	V	F	V	H	.	F	S	A	I	Q	N	D	N	Y	R	T	L	F	E	G	Q	K	V	T	F	S	I	E	S	G	A	K	G	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A
Query Conservation																.	.																.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.							.	.																.								.	.	.	.			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																																.	.	.	.			.
Template Sequence		Y	Q	G	N	I	Q	.	.	I	S	E	Y	N	F	L	E	G	S	V	S	L	P	R	F	S	K	P	V	L	I	V	G	Q	K	N	L	N	R	A	.	.	.	.	F	N	.	G	D	Q	V	I	V	E	L	L	P	Q	S	E	W	K	A	P	S	S	I	V	L	D	S	E	H	F	D	I	Q	P	T	A	K
Template Known Secondary structure								.	.			S	S	B	T	T							S	S	S	S	S						S					T	T		.	.	.	.		T	.	T										G	G	G		B				S	S		B		T	T	T				B		B
Template Predicted Secondary structure								.	.																																.	.	.	.			.
Template SS confidence
		274	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		66	.	.	.	70	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	I	I	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	Y	I	Q	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions